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Payroll clerk salary in California

The median payroll clerk in California earns $65,340 a year, or $31.41 an hour, in the Bureau of Labor Statistics’ May 2025 survey. That is 12% above the national median of $58,260, and 2nd of the 54 states and territories BLS publishes.

The middle half of California’s 20,590 payroll clerks earn between $56,230 and $78,870. The highest paying metro area in the state is San Francisco-Oakland-Fremont, CA, at $80,510.

Liaison does the routine half of a payroll clerk’s job for 9% of what one costs in California. See how.

Payroll clerk salary by city in California

Every metro area in California where BLS publishes a median for payroll clerks, highest first. A metro that crosses a state line appears under each of its states.

Metro areaMedian annualMedian hourlyMiddle half earnsEmployed
San Francisco-Oakland-Fremont, CA$80,510$38.71$66,480 to $95,0502,260
San Jose-Sunnyvale-Santa Clara, CA$77,950$37.48$68,330 to $95,0301,000
Santa Rosa-Petaluma, CA$68,870$33.11$58,070 to $79,250300
Santa Cruz-Watsonville, CA$68,380$32.88$56,970 to $75,360120
Sacramento-Roseville-Folsom, CA$65,810$31.64$56,610 to $75,9402,000
Los Angeles-Long Beach-Anaheim, CA$65,040$31.27$59,810 to $78,1606,600
San Diego-Chula Vista-Carlsbad, CA$63,810$30.68$50,840 to $77,2801,840
Vallejo, CA$63,170$30.37$55,770 to $78,190190
Napa, CA$62,920$30.25$55,230 to $78,950100
Hanford-Corcoran, CA$62,050$29.83$52,180 to $72,67090
Modesto, CA$61,980$29.80$53,080 to $74,590260
Oxnard-Thousand Oaks-Ventura, CA$61,310$29.48$52,520 to $72,630320
Stockton-Lodi, CA$61,230$29.44$49,170 to $74,410340
Riverside-San Bernardino-Ontario, CA$61,200$29.42$51,330 to $75,4401,630
Merced, CA$60,350$29.02$50,800 to $70,880100
San Luis Obispo-Paso Robles, CA$60,040$28.86$48,510 to $74,880150
Fresno, CA$59,730$28.72$48,690 to $71,000710
Chico, CA$59,720$28.71$50,910 to $66,41080
Salinas, CA$59,530$28.62$48,760 to $74,620270
Yuba City, CA$58,840$28.29$51,420 to $70,83070
Santa Maria-Santa Barbara, CA$57,970$27.87$50,020 to $73,720240
El Centro, CA$57,610$27.70$45,320 to $74,390100
Bakersfield-Delano, CA$56,650$27.24$46,480 to $71,830500
Redding, CA$55,430$26.65$50,540 to $68,48080
Visalia, CA$54,890$26.39$46,060 to $65,040240

What a payroll clerk costs an employer in California

Wages are the start. At employers with fewer than 50 workers, benefits add 35% on top (BLS Employer Costs for Employee Compensation), so a payroll clerk at the California median costs about $88,200 a year. The employer’s view for every state and metro is on what a payroll clerk costs, and the routine part of the job is what Liaison does inside the tools a business already runs.

Liaison Professional · $629 a month

The routine half of a payroll clerk’s job, for 9% of what one costs in California.

  • Collects the hours and the approvals before the run and flags what does not add up.
  • Cross-checks the payroll totals against the books at month end.
  • Tells you on Monday whether Friday’s payroll is covered, from the bank, the books and the payouts on their way.

Professional is $629 a month, $7,548 a year, against about $88,200 a year for a payroll clerk at the California median once benefits are added. On Professional we connect your tools, bring your data in and set up the first rules with you. Anything that moves money waits for your yes.

“Cut our month-end close from 4 days to 4 hours.” Marcus C., owner

$629 a month, or $500 a month on a 12-month term. Prefer to start on your own? Starter is $149 a month, self-serve, with a free trial first: 7 days, no card. More: AI bookkeeper.

Liaison, on its own at 8:02 AM: Morning, Sam. Payroll runs Friday, $57,300. You are covered. $81,200 available Friday from the QuickBooks checking balance, Friday’s Stripe payout and the Gusto payroll run.

Questions

How much does a payroll clerk make in California?

The median payroll clerk in California earned $65,340 a year, or $31.41 an hour, in May 2025. The middle half earned between $56,230 and $78,870. Nationally the median is $58,260, so California pays 12% more than the country as a whole.

Which cities in California pay payroll clerks the most?

San Francisco-Oakland-Fremont, CA ($80,510), San Jose-Sunnyvale-Santa Clara, CA ($77,950) and Santa Rosa-Petaluma, CA ($68,870).

What does a payroll clerk cost an employer in California?

Benefits at employers with fewer than 50 workers add 35% on top of wages, so a payroll clerk at the California median costs about $88,200 a year. The employer’s view is at useliaison.com/back-office-costs/payroll-clerk.

See it on your own business.

Thirty minutes with us, on your own tools. Bring the thing that eats your evenings and watch it get handled from your own inbox, calendar and books.

Professional is $629 a month and we set it up with you. Starter is $149 a month, self-serve, with the free trial first: 7 days, no card. Every plan is on the pricing page.